在我们查阅文献或做分析时经常会看见除A/G/C/T以外的符号用来代表一类碱基,现在将DNA、RNA水平下的标准命名总结如下:

DNA水平

符号含义描述
AAAdenine, 腺嘌呤
CCCytosine, 胞嘧啶
GGGuanine, 鸟嘌呤
TTThymine, 胸腺嘧啶
BC/ G / Tnot-A (B follows A in alphabet)
DA / G / Tnot-C (D follows C in alphabet)
HA / C / Tnot-G (H follows G in alphabet)
KG / TKeto, 酮类
MA / CaMino, 胺基
NA / C / G / TaNy,任意的
RA / GpuRine,嘌呤类
SG / CStrong interaction (3 H-bonds)
VA / C / Gnot-T / not-U ( V follows U )
WA / TWeak interaction (2 H-bonds)
YC / TpYrimidine, 嘧啶
X*A / C / G / Tmasked nucleotide
-*nonegap of indeterminate length

RNA水平

符号含义描述
aAAdenosine, 腺甘酸
cCCytidine, 胞嘧啶核苷
gGGuanosine, 鸟嘌呤核苷
uUUridine, 尿嘧啶核苷
bc / g / unot-a (b follows a in alphabet)
da / g / unot-c (d follows c in alphabet)
ha / c / unot-g (h follows g in alphabet)
kg / uketo, 酮类
ma / camino, 胺基
na / c / g / uany,任意
ra / gpurine, 嘌呤
sg / cstrong interaction (3 H-bonds)
va / c / gnot-u ( v follows u
wa / uweak interaction (2 H-bonds)
yc / upyrimidine

参考资料:

1.http://varnomen.hgvs.org/bg-material/standards/