本篇总结了蛋白质组常用缩略词名词:

DIAData independent acquisition
DDAData dependent acquisition
TMTTandem Mass Tag
iTRAQisobaric tags for relative and absolute quantitation
SILACStable Isotope Labeling with Amino acids in Cell culture
PRMParallel Reaction Monitoring
MRMmultiple reaction monitoring
SRMselected reaction monitoring
SWATHSequential Window Acquisition of all THeoretical Mass Spectra
TQStriple quadrupole system
Label FreeLabel Free Quantitative Proteomics
LFQLabel Free Quantitative
PTMPost-translational modification
PPIprotein-protein interaction
FDRfalse discovery rate
MSmass spectrometry
SILACstable isotope labeling of amino acids in cell culture
HPLChigh performance liquid chromatography
PSMpeptide-to-spectrum match / peptide-spectrum matches
CPTACClinical Proteomic Technology Assessment for Cancer Network
UPSUniversal Proteomics Standard 1
FPfalse positives
FNfalse negatives
TPtrue positives
TNtrue negatives
PPVpositive predictive value
FCfold change
ROCreceiver operating curve
pAUCpartial area under the curve
rpAUCrelative partial area under the curve
DEdifferential expression
DEPdifferential expression proteins